C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: DEAH (Asp-Glu-Ala-His) box polypeptide 34
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000328771 DHX34-001 ENSG00000134815 9606 + 19:47349281-47382704 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLungMuscleOvaryPlacentaTestisENST00000328771
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Lung Muscle Ovary Placenta Testis
ENST00000328771 0.721±0.00 3.115±0.00 0.734±0.00 0.858±0.39 1.698±0.28 0.760±0.49 2.147±1.60 0.286±0.00 5.164±0.00 2.925±2.04 2.461±0.60 10.587±4.95

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008G1 CIL_0008G1_0001 VISTA 19:46806794-47408636

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000956 IMP nuclear-transcribed mRNA catabolic process
GO:0003676 IEA nucleic acid binding
GO:0004386 IEA helicase activity
GO:0005524 IEA ATP binding
GO:0016020 IDA membrane
GO:0044822 IDA poly(A) RNA binding
GO:2000623 IMP negative regulation of nuclear-transcribed mRNA catabolic process, nonsense-mediated decay

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000094816 Dhx34-201 protein_coding Mus_musculus 0 3391
ENSMUST00000163968 Dhx34-202 protein_coding Mus_musculus 0 3391
ENSMUST00000119102 Dhx34-003 protein_coding Mus_musculus 0 3369
ENSMUST00000118795 Dhx34-002 protein_coding Mus_musculus 0 3369
ENSMUST00000121123 Dhx34-001 protein_coding Mus_musculus 0 3369
ENSMUST00000128452 Dhx34-005 retained_intron Mus_musculus 0 1120

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