C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: septin 9
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000329047 SEPT9-201 ENSG00000184640 9606 + 17:77319515-77500592 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBreastLiverLungMuscleOvaryPlacentaENST00000329047
Transcript ID Adipose Breast Liver Lung Muscle Ovary Placenta
ENST00000329047 14.148±0.00 3.205±1.53 3.016±0.00 6.461±0.00 1.886±0.94 16.073±0.00 10.052±1.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000199 CIL_000199_0001 CGP 17:77086716-77500596

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001725 IDA stress fiber
GO:0003924 TAS:IEA GTPase activity
GO:0005515 IPI protein binding
GO:0005525 IEA GTP binding
GO:0005737 TAS cytoplasm
GO:0005874 IDA microtubule
GO:0006184 TAS GTP catabolic process
GO:0007049 IEA cell cycle
GO:0015629 IDA actin cytoskeleton
GO:0031105 IEA septin complex
GO:0048471 IDA perinuclear region of cytoplasm
GO:0051291 IDA protein heterooligomerization
GO:0051301 IEA cell division

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000106354 Sept9-006 protein_coding Mus_musculus 0 2089
ENSMUST00000093907 Sept9-001 protein_coding Mus_musculus 0 1825
ENSMUST00000019038 Sept9-002 protein_coding Mus_musculus 0 1823
ENSMUST00000106349 Sept9-004 protein_coding Mus_musculus 0 1306
ENSMUST00000100193 Sept9-005 protein_coding Mus_musculus 0 1306
ENSMUST00000155331 Sept9-010 retained_intron Mus_musculus 0 1083
ENSMUST00000127383 Sept9-007 protein_coding Mus_musculus 0 891
ENSDART00000129313 sept9a-001 protein_coding Danio_rerio 0 566
ENSDART00000023039 sept9a-003 protein_coding Danio_rerio 0 566
ENSDART00000127913 sept9b-201 protein_coding Danio_rerio 0 523
ENSDART00000061143 sept9b-001 protein_coding Danio_rerio 0 523
ENSMUST00000134852 Sept9-008 retained_intron Mus_musculus 0 472
ENSDART00000141425 sept9b-002 protein_coding Danio_rerio 0 326

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