C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: cytochrome P450, family 2, subfamily A, polypeptide 13
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000330436 CYP2A13-001 ENSG00000197838 9606 + 19:41088472-41096195 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainColonLiverLungPlacentaTestisENST00000330436
Transcript ID Brain Colon Liver Lung Placenta Testis
ENST00000330436 0.016±0.00 0.141±0.00 0.076±0.00 0.306±0.10 0.329±0.00 0.139±0.02

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007H6 CIL_0007H6_0005 CGP 19:40991299-41096195
CIL_0007H6 CIL_0007H6_0007 CGP 19:41088472-41128366

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005506 IEA iron ion binding
GO:0005789 TAS endoplasmic reticulum membrane
GO:0006805 TAS xenobiotic metabolic process
GO:0016705 IEA oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen
GO:0020037 IDA:IEA heme binding
GO:0044281 TAS small molecule metabolic process
GO:0055114 IEA oxidation-reduction process
GO:0070330 IEA aromatase activity

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000005685 Cyp2a5-001 protein_coding Mus_musculus 0 1565
ENSMUST00000098657 Cyp2a4-201 protein_coding Mus_musculus 0 1465
ENSMUST00000168869 Cyp2a5-002 nonsense_mediated_decay Mus_musculus 0 926
ENSMUST00000075552 Cyp2a12-201 protein_coding Mus_musculus 0 909
ENSMUST00000170227 Cyp2a22-201 protein_coding Mus_musculus 0 893
ENSMUST00000165641 Cyp2a5-003 processed_transcript Mus_musculus 0 867

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