C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: integrator complex subunit 5
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000330574 INTS5-001 ENSG00000185085 9606 - 11:62646848-62653302 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000330574
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000330574 8.324±0.00 11.375±0.00 3.639±1.43 7.417±0.00 5.362±0.00 2.403±1.84 6.881±4.99 3.867±3.07 6.780±0.00 4.505±3.96 9.130±6.19 8.040±1.13 10.641±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00089X CIL_00089X_0001 VISTA 11:62298635-62900076
CIL_0005IC CIL_0005IC_0002 CGP 11:62624826-62653302

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0016020 IDA membrane
GO:0016021 IEA integral component of membrane
GO:0016180 IDA snRNA processing
GO:0032039 IDA integrator complex

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000096249 Ints5-201 protein_coding Mus_musculus 0 3803
ENSMUST00000117079 Gm13126-001 processed_pseudogene Mus_musculus 0 3358
ENSMUST00000188635 Ints5-002 processed_transcript Mus_musculus 0 658
ENSMUST00000191089 Ints5-001 protein_coding Mus_musculus 0 431

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