C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: KDEL (Lys-Asp-Glu-Leu) endoplasmic reticulum protein retention receptor 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000330720 KDELR1-001 ENSG00000105438 9606 - 19:48382570-48391553 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000330720
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000330720 92.153±0.00 43.020±0.00 17.593±0.00 15.864±4.78 43.946±17.11 52.307±30.43 19.767±16.52 55.392±29.28 37.874±26.13 52.253±43.22 40.308±29.84 79.296±50.56 146.173±44.80 43.269±25.68

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005046 TAS KDEL sequence binding
GO:0005783 IEA endoplasmic reticulum
GO:0005793 IDA endoplasmic reticulum-Golgi intermediate compartment
GO:0005794 IEA Golgi apparatus
GO:0005801 IEA cis-Golgi network
GO:0006621 IEA protein retention in ER lumen
GO:0006886 TAS intracellular protein transport
GO:0016020 TAS membrane
GO:0016021 IEA integral component of membrane
GO:0016192 IEA vesicle-mediated transport
GO:0031410 IEA cytoplasmic vesicle
GO:0046923 IEA ER retention sequence binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000002855 Kdelr1-001 protein_coding Mus_musculus 0 1092
ENSMUST00000107718 Kdelr1-004 protein_coding Mus_musculus 0 854
ENSMUST00000107719 Kdelr1-002 protein_coding Mus_musculus 0 606
ENSMUST00000133022 Kdelr1-005 processed_transcript Mus_musculus 0 590
ENSMUST00000146932 Kdelr1-003 processed_transcript Mus_musculus 0 508

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