C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: noggin
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000332822 NOG-001 ENSG00000183691 9606 + 17:56593699-56595590 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000332822
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000332822 0.138±0.00 0.299±0.00 0.037±0.00 0.783±0.43 0.215±0.00 0.232±0.00 0.066±0.05 0.125±0.00 0.080±0.00 0.434±0.28 0.633±0.37 0.106±0.02 29.707±12.35 1.093±0.39

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004WZ CIL_0004WZ_0003 CGP 17:56110958-56595590

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000122 IEA negative regulation of transcription from RNA polymerase II promoter
GO:0001501 TAS skeletal system development
GO:0001649 ISS osteoblast differentiation
GO:0001655 IEA urogenital system development
GO:0001657 IEA ureteric bud development
GO:0001701 IEA in utero embryonic development
GO:0001706 IEA endoderm formation
GO:0001707 IEA mesoderm formation
GO:0001837 ISS epithelial to mesenchymal transition
GO:0001839 IEA neural plate morphogenesis
GO:0001843 IEA neural tube closure
GO:0005515 IPI protein binding
GO:0005576 TAS extracellular region
GO:0005615 IDA extracellular space
GO:0007389 IEA pattern specification process
GO:0007399 TAS nervous system development
GO:0007411 IEA axon guidance
GO:0007417 IEA central nervous system development
GO:0007420 IEA brain development
GO:0008045 IEA motor neuron axon guidance
GO:0009953 IDA dorsal/ventral pattern formation
GO:0010629 IEA negative regulation of gene expression
GO:0019955 IPI cytokine binding
GO:0021510 IEA spinal cord development
GO:0021533 IMP cell differentiation in hindbrain
GO:0021915 IEA neural tube development
GO:0021983 IEA pituitary gland development
GO:0030336 IDA negative regulation of cell migration
GO:0030509 TAS BMP signaling pathway
GO:0030510 IEA regulation of BMP signaling pathway
GO:0030514 ISS negative regulation of BMP signaling pathway
GO:0035019 IMP somatic stem cell maintenance
GO:0042060 ISS wound healing
GO:0042474 IMP middle ear morphogenesis
GO:0042733 IMP embryonic digit morphogenesis
GO:0042803 IDA protein homodimerization activity
GO:0045596 IEA negative regulation of cell differentiation
GO:0045668 IDA negative regulation of osteoblast differentiation
GO:0045944 IEA positive regulation of transcription from RNA polymerase II promoter
GO:0048318 IEA axial mesoderm development
GO:0048570 IEA notochord morphogenesis
GO:0048646 IEA anatomical structure formation involved in morphogenesis
GO:0048706 IMP embryonic skeletal system development
GO:0048712 ISS negative regulation of astrocyte differentiation
GO:0048762 IEA mesenchymal cell differentiation
GO:0050679 IEA positive regulation of epithelial cell proliferation
GO:0051216 IEA cartilage development
GO:0060044 ISS negative regulation of cardiac muscle cell proliferation
GO:0060173 IMP limb development
GO:0060272 IMP embryonic skeletal joint morphogenesis
GO:0060302 IPI negative regulation of cytokine activity
GO:0060325 IEA face morphogenesis
GO:0060394 IDA negative regulation of pathway-restricted SMAD protein phosphorylation
GO:0060425 IEA lung morphogenesis
GO:0060513 IEA prostatic bud formation
GO:0060676 IEA ureteric bud formation
GO:0060825 IMP fibroblast growth factor receptor signaling pathway involved in neural plate anterior/posterior pattern formation
GO:0061037 IEA negative regulation of cartilage development
GO:0061053 IEA somite development
GO:0071773 IEA cellular response to BMP stimulus
GO:0090090 IDA negative regulation of canonical Wnt signaling pathway
GO:0090190 ISS positive regulation of branching involved in ureteric bud morphogenesis
GO:0090193 ISS positive regulation of glomerulus development
GO:2000313 IMP regulation of fibroblast growth factor receptor signaling pathway involved in neural plate anterior/posterior pattern formation
GO:2001234 IEA negative regulation of apoptotic signaling pathway

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000061728 Nog-001 protein_coding Mus_musculus 0 2263

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