C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: B-cell CLL/lymphoma 9-like
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000334801 BCL9L-001 ENSG00000186174 9606 - 11:118893875-118910904 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; HeartLiverENST00000334801
Transcript ID Heart Liver
ENST00000334801 0.064±0.00 0.216±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00021W CIL_00021W_0002 CGP 11:118747766-118897799
CIL_00021X CIL_00021X_0002 CGP 11:118883766-118925608

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003713 NAS transcription coactivator activity
GO:0005634 IDA nucleus
GO:0006351 IEA transcription, DNA-templated
GO:0008013 IDA beta-catenin binding
GO:0010718 IMP positive regulation of epithelial to mesenchymal transition
GO:0022604 IMP regulation of cell morphogenesis
GO:0030512 IMP negative regulation of transforming growth factor beta receptor signaling pathway
GO:0035019 IEA somatic stem cell maintenance
GO:0035914 IEA skeletal muscle cell differentiation
GO:0045944 IMP positive regulation of transcription from RNA polymerase II promoter
GO:0060070 IEA canonical Wnt signaling pathway

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000074989 Bcl9l-201 protein_coding Mus_musculus 0 6004
ENSMUST00000062215 Cxcr5-201 protein_coding Mus_musculus 0 769
ENSMUST00000179828 Cxcr5-202 protein_coding Mus_musculus 0 769

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