C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: proline-rich nuclear receptor coactivator 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000336032 PNRC1-001 ENSG00000146278 9606 + 6:89080778-89085160 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000336032
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000336032 41.277±0.00 7.189±0.00 9.980±0.00 11.724±2.76 20.347±4.60 32.611±16.32 18.153±7.68 14.444±6.50 33.494±5.47 42.092±10.40 56.595±40.19 35.308±27.32 24.290±8.51 14.571±9.99

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006BS CIL_0006BS_0002 CGP 6:88610266-89085160

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0005634 IEA nucleus
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IEA regulation of transcription, DNA-templated

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000049357 Pnrc1-001 protein_coding Mus_musculus 0 985
ENSMUST00000137589 Pnrc1-002 processed_transcript Mus_musculus 0 555
ENSMUST00000155616 Pnrc1-003 processed_transcript Mus_musculus 0 551

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