C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: zinc finger protein 224
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000336976 ZNF224-001 ENSG00000267680 9606 + 19:44094392-44109886 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000336976
Transcript ID Adipose Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000336976 0.536±0.00 1.835±0.00 1.499±0.00 0.963±0.00 0.315±0.04 1.866±0.00 0.307±0.16 1.154±0.00 0.218±0.00 1.471±0.68 0.379±0.00 0.705±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003UP CIL_0003UP_0009 CGP 19:44094339-44134816

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003676 IEA nucleic acid binding
GO:0003677 IEA DNA binding
GO:0003700 IBA sequence-specific DNA binding transcription factor activity
GO:0005515 IPI protein binding
GO:0005622 IEA intracellular
GO:0005634 IDA nucleus
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0017053 IDA transcriptional repressor complex
GO:0031965 IDA nuclear membrane
GO:0045892 IDA negative regulation of transcription, DNA-templated
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000037448 Zfp109-201 protein_coding Mus_musculus 2e-40 172
ENSMUST00000073833 Zfp111-201 protein_coding Mus_musculus 2e-39 169
ENSMUST00000086006 Zfp111-001 protein_coding Mus_musculus 2e-39 169
ENSMUST00000117905 Gm15442-001 processed_pseudogene Mus_musculus 9e-39 167
ENSMUST00000086010 Zfp114-201 protein_coding Mus_musculus 9e-39 167
ENSMUST00000056683 Zfp111-002 protein_coding Mus_musculus 1e-36 159
ENSMUST00000160563 Zfp111-005 processed_transcript Mus_musculus 5e-36 158
ENSMUST00000032696 Zfp93-002 protein_coding Mus_musculus 2e-34 152
ENSMUST00000108438 Zfp93-001 protein_coding Mus_musculus 2e-34 152
ENSMUST00000072713 Zfp108-201 protein_coding Mus_musculus 9e-34 150
ENSDART00000130806 zgc:113389-203 protein_coding Danio_rerio 0.00002 57

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