C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: SPRY domain containing 4
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000338146 SPRYD4-001 ENSG00000176422 9606 + 12:56468567-56479707 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000338146
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000338146 0.724±0.00 2.100±0.00 0.186±0.00 0.615±0.10 1.295±0.00 0.485±0.05 0.676±0.44 2.077±0.10 2.705±2.45 0.419±0.18 0.497±0.15 1.275±0.59 0.534±0.29 0.872±0.16

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002KT CIL_0002KT_0002 CGP 12:56468567-56488414

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005515 IEA protein binding
GO:0005634 IDA nucleus
GO:0005739 IEA mitochondrion
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000061995 Spryd4-201 protein_coding Mus_musculus 0 780
ENSMUST00000135441 Gls2-003 retained_intron Mus_musculus 0 372
ENSMUST00000134104 Gls2-002 nonsense_mediated_decay Mus_musculus 0 372
ENSMUST00000159440 Gls2-011 nonsense_mediated_decay Mus_musculus 0 372
ENSMUST00000143827 Gls2-005 nonsense_mediated_decay Mus_musculus 0 372
ENSMUST00000044776 Gls2-001 protein_coding Mus_musculus 0 372
ENSMUST00000132441 Gls2-010 protein_coding Mus_musculus 0 333
ENSMUST00000145591 Gls2-009 processed_transcript Mus_musculus 0 226
ENSMUST00000134461 Gls2-007 retained_intron Mus_musculus 0.0000000000009 82
ENSMUST00000067058 Pigw-001 protein_coding Mus_musculus 0.000004 60

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