C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: platelet endothelial aggregation receptor 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000338302 PEAR1-001 ENSG00000187800 9606 + 1:156893720-156916429 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBreastColonHeartKidneyLiverOvaryPlacentaTestisENST00000338302
Transcript ID Adipose Breast Colon Heart Kidney Liver Ovary Placenta Testis
ENST00000338302 2.633±0.00 1.198±0.97 1.330±0.00 1.647±0.00 1.655±0.00 0.232±0.00 2.980±0.36 4.060±2.24 3.107±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000850 CIL_000850_0001 VISTA 1:156360457-156965492

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001891 IEA phagocytic cup
GO:0005515 IEA protein binding
GO:0016021 IEA integral component of membrane
GO:0043654 IEA recognition of apoptotic cell

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000090981 Pear1-203 protein_coding Mus_musculus 0 2913
ENSMUST00000029714 Pear1-201 protein_coding Mus_musculus 0 2913
ENSMUST00000079083 Pear1-202 protein_coding Mus_musculus 0 2913
ENSMUST00000174759 Pear1-004 protein_coding Mus_musculus 0 2913
ENSMUST00000172621 Pear1-001 protein_coding Mus_musculus 0 2913
ENSMUST00000174267 Pear1-002 nonsense_mediated_decay Mus_musculus 0 2706
ENSMUST00000174713 Pear1-005 nonsense_mediated_decay Mus_musculus 0 2433
ENSMUST00000172631 Pear1-003 retained_intron Mus_musculus 0 2182
ENSMUST00000173490 Pear1-012 retained_intron Mus_musculus 0 848
ENSMUST00000172669 Pear1-013 nonsense_mediated_decay Mus_musculus 4e-18 99

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