C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: TEA domain family member 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000338863 TEAD3-001 ENSG00000007866 9606 - 6:35473597-35497076 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000338863
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000338863 7.909±0.00 7.706±0.00 1.199±0.00 1.573±0.00 4.780±3.84 16.550±15.02 2.374±1.57 5.945±5.31 3.346±1.09 10.035±9.88 3.803±2.77 12.094±9.38 16.297±6.62 7.368±3.70

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008UQ CIL_0008UQ_0001 VISTA 6:35189352-35792826
CIL_0002EP CIL_0002EP_0001 CGP 6:35468408-35497076
CIL_0002F1 CIL_0002F1_0001 CGP 6:35473597-35512938

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001085 IPI RNA polymerase II transcription factor binding
GO:0003677 IEA DNA binding
GO:0003700 IDA:IEA sequence-specific DNA binding transcription factor activity
GO:0005515 IPI protein binding
GO:0005634 IEA nucleus
GO:0005654 TAS nucleoplasm
GO:0005667 IEA transcription factor complex
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0006357 TAS regulation of transcription from RNA polymerase II promoter
GO:0006367 TAS transcription initiation from RNA polymerase II promoter
GO:0007565 TAS female pregnancy
GO:0010467 TAS gene expression
GO:0035329 IDA:IEA hippo signaling
GO:0045944 IEA positive regulation of transcription from RNA polymerase II promoter
GO:1902459 IEA positive regulation of stem cell maintenance

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000080572 Tead3-202 protein_coding Mus_musculus 0 1988
ENSMUST00000156862 Tead3-001 protein_coding Mus_musculus 0 1988
ENSMUST00000114799 Tead3-002 protein_coding Mus_musculus 0 1757
ENSMUST00000154873 Tead3-003 protein_coding Mus_musculus 0 1757
ENSMUST00000127212 Tead3-004 retained_intron Mus_musculus 0 1234
ENSMUST00000146668 Tead3-005 retained_intron Mus_musculus 0 645
ENSMUST00000112157 Tead4-005 protein_coding Mus_musculus 0 409
ENSMUST00000006311 Tead4-001 protein_coding Mus_musculus 0 409
ENSMUST00000130454 Tead4-002 protein_coding Mus_musculus 0 409
ENSMUST00000133118 Tead4-003 protein_coding Mus_musculus 1e-16 94

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