C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ribosomal protein L14
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000338970 RPL14-001 ENSG00000188846 9606 + 3:40457292-40462370 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000338970
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000338970 46.551±0.00 44.218±0.00 10.333±0.00 29.869±0.67 36.352±3.63 48.001±1.23 15.216±2.65 54.967±11.88 36.730±0.00 23.875±0.00 58.588±0.00 109.641±42.71 370.266±0.00 79.113±2.93

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000482 CIL_000482_0001 CGP 3:40387156-40462370

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000184 TAS nuclear-transcribed mRNA catabolic process, nonsense-mediated decay
GO:0003723 TAS RNA binding
GO:0003735 NAS:IEA structural constituent of ribosome
GO:0005515 IPI protein binding
GO:0005622 IEA intracellular
GO:0005737 IDA cytoplasm
GO:0005829 TAS cytosol
GO:0005840 IEA ribosome
GO:0006364 IMP rRNA processing
GO:0006412 NAS:IEA translation
GO:0006413 TAS translational initiation
GO:0006414 TAS translational elongation
GO:0006415 TAS translational termination
GO:0006614 TAS SRP-dependent cotranslational protein targeting to membrane
GO:0010467 TAS gene expression
GO:0016020 IDA membrane
GO:0016032 TAS viral process
GO:0016070 TAS RNA metabolic process
GO:0016071 TAS mRNA metabolic process
GO:0019058 TAS viral life cycle
GO:0019083 TAS viral transcription
GO:0022625 IDA cytosolic large ribosomal subunit
GO:0042273 IMP ribosomal large subunit biogenesis
GO:0044267 TAS cellular protein metabolic process
GO:0044822 IDA poly(A) RNA binding
GO:0070062 IDA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000165532 Rpl14-201 protein_coding Mus_musculus 0 713
ENSMUST00000026901 Rpl14-ps1-201 pseudogene Mus_musculus 0 682
ENSMUST00000117680 Gm14733-001 processed_pseudogene Mus_musculus 1e-20 104

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