C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: acidic (leucine-rich) nuclear phosphoprotein 32 family, member B
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000339399 ANP32B-001 ENSG00000136938 9606 + 9:97983361-98015943 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000339399
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000339399 71.525±0.00 24.220±0.00 1.369±0.00 12.547±11.35 27.407±22.95 24.827±22.83 10.068±9.73 24.064±0.00 11.957±6.09 32.425±29.72 20.200±19.97 61.475±34.06 72.455±17.52 50.687±1.27

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0009AQ CIL_0009AQ_0001 VISTA 9:97562581-98164397
CIL_000853 CIL_000853_0001 VISTA 9:97573936-98178227
CIL_0009AR CIL_0009AR_0001 VISTA 9:97573936-98175680
CIL_00029P CIL_00029P_0001 CGP 9:97926791-98015943
CIL_00029Q CIL_00029Q_0001 CGP 9:97983361-98083075

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001944 IEA vasculature development
GO:0005634 IDA nucleus
GO:0005730 IDA nucleolus
GO:0005737 IDA cytoplasm
GO:0006334 IDA nucleosome assembly
GO:0006919 IMP activation of cysteine-type endopeptidase activity involved in apoptotic process
GO:0021591 IEA ventricular system development
GO:0042393 IDA histone binding
GO:0045596 IDA negative regulation of cell differentiation
GO:0046827 IMP positive regulation of protein export from nucleus
GO:0048839 IEA inner ear development
GO:0060021 IEA palate development
GO:0070062 IDA extracellular vesicular exosome
GO:0070063 IDA RNA polymerase binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000102926 Anp32b-001 protein_coding Mus_musculus 0 1406
ENSMUST00000181922 Anp32b-ps1-001 processed_pseudogene Mus_musculus 0 861
ENSMUST00000122215 Anp32b-ps1-001 processed_pseudogene Mus_musculus 0 861
ENSMUST00000163646 Gm5263-001 processed_pseudogene Mus_musculus 0 551

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