C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ring finger protein 133
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000340112 RNF133-001 ENSG00000188050 9606 - 7:122697712-122699156 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBladderBrainBreastColonHeartKidneyLiverLungOvaryPlacentaTestisENST00000340112
Transcript ID Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Ovary Placenta Testis
ENST00000340112 0.023±0.00 0.111±0.00 0.061±0.01 0.508±0.50 0.666±0.00 0.082±0.05 0.095±0.04 0.057±0.04 0.937±0.87 0.153±0.19 0.018±0.00 27.178±15.79

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003QO CIL_0003QO_0001 CGP 7:122301394-122886759
CIL_0001E7 CIL_0001E7_0001 CGP 7:122318425-122886759
CIL_0001E8 CIL_0001E8_0001 CGP 7:122697712-122702967

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding
GO:0005789 IEA endoplasmic reticulum membrane
GO:0008270 IEA zinc ion binding
GO:0016021 IEA integral component of membrane
GO:0016874 IEA ligase activity
GO:0046872 IEA metal ion binding
GO:0051865 IEA protein autoubiquitination

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000115354 Rnf133-002 protein_coding Mus_musculus 0 977
ENSMUST00000063548 Rnf133-001 protein_coding Mus_musculus 0 442

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