C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description:
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000340589 RP11-466G12.3-001 ENSG00000249934 9606 - 4:88508591-88510403 processed_pseudogene

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBrainHeartOvaryPlacentaTestisENST00000340589
Transcript ID Bladder Brain Heart Ovary Placenta Testis
ENST00000340589 0.026±0.00 0.044±0.00 0.013±0.00 0.048±0.00 0.014±0.00 0.040±0.01

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000111994 Ncoa4-003 protein_coding Mus_musculus 0 1092
ENSMUST00000163336 Ncoa4-001 protein_coding Mus_musculus 0 1092
ENSMUST00000022467 Gm6768-201 protein_coding Mus_musculus 0 1092
ENSMUST00000168334 Ncoa4-002 nonsense_mediated_decay Mus_musculus 0 1075
ENSMUST00000169722 Ncoa4-004 protein_coding Mus_musculus 0 680
ENSMUST00000168385 Ncoa4-005 protein_coding Mus_musculus 0 508
ENSMUST00000168034 Ncoa4-006 protein_coding Mus_musculus 0 292
ENSMUST00000164341 Ncoa4-008 protein_coding Mus_musculus 0 239

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