C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: spastic paraplegia 7 (pure and complicated autosomal recessive)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000341316 SPG7-002 ENSG00000197912 9606 + 16:89508411-89537721 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBreastHeartLungPlacentaTestisENST00000341316
Transcript ID Bladder Breast Heart Lung Placenta Testis
ENST00000341316 1.673±0.00 4.395±0.00 3.251±1.95 2.277±0.67 3.337±0.08 8.124±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008HA CIL_0008HA_0001 VISTA 16:89018329-89621235
CIL_000332 CIL_000332_0001 CGP 16:89267627-89557768
CIL_000331 CIL_000331_0001 CGP 16:89490917-89566828

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004222 IDA:IEA metalloendopeptidase activity
GO:0005515 IPI protein binding
GO:0005524 IEA ATP binding
GO:0006508 IEA proteolysis
GO:0007399 TAS nervous system development
GO:0008219 IEA cell death
GO:0008233 TAS peptidase activity
GO:0008270 IEA zinc ion binding
GO:0016021 IEA integral component of membrane
GO:0016887 IEA ATPase activity
GO:0051082 TAS unfolded protein binding

Homologs

No Homologs available.

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