C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: alkylglycerol monooxygenase
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000342526 AGMO-001 ENSG00000187546 9606 - 7:15200318-15562015 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastHeartKidneyLiverLungMuscleOvaryPlacentaENST00000342526
Transcript ID Adipose Adrenal Brain Breast Heart Kidney Liver Lung Muscle Ovary Placenta
ENST00000342526 0.696±0.00 0.543±0.00 0.345±0.00 0.613±0.00 0.031±0.00 3.106±2.45 2.166±0.00 0.108±0.00 0.087±0.00 0.006±0.00 0.190±0.11

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00027H CIL_00027H_0002 CGP 7:14145049-15562015
CIL_00027G CIL_00027G_0002 CGP 7:15200318-15686812

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005506 IMP:IEA iron ion binding
GO:0005783 IDA endoplasmic reticulum
GO:0006633 IEA fatty acid biosynthetic process
GO:0006643 IDA membrane lipid metabolic process
GO:0016021 IEA integral component of membrane
GO:0016491 IEA oxidoreductase activity
GO:0046485 IDA ether lipid metabolic process
GO:0050479 IDA glyceryl-ether monooxygenase activity
GO:0055114 IEA oxidation-reduction process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000049874 Agmo-001 protein_coding Mus_musculus 0 1404
ENSMUST00000159998 Agmo-003 nonsense_mediated_decay Mus_musculus 0 1334
ENSMUST00000160390 Agmo-002 protein_coding Mus_musculus 0 1269
ENSMUST00000160158 Agmo-004 retained_intron Mus_musculus 0 915

Loading