C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: regulatory solute carrier protein, family 1, member 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000345034 RSC1A1-001 ENSG00000215695 9606 + 1:15659869-15661722 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBrainBreastColonHeartLungENST00000345034
Transcript ID Bladder Brain Breast Colon Heart Lung
ENST00000345034 1.849±0.00 2.072±0.00 2.657±0.00 4.062±0.00 1.396±0.00 4.866±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007QM CIL_0007QM_0001 VISTA 1:15548708-16149793

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding
GO:0005634 IDA nucleus
GO:0005794 IDA Golgi apparatus
GO:0005886 IDA plasma membrane
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0006810 TAS transport
GO:0008200 TAS ion channel inhibitor activity
GO:0030054 IDA cell junction
GO:0043231 IDA intracellular membrane-bounded organelle
GO:0051051 IDA negative regulation of transport

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000105782 Rsc1a1-001 protein_coding Mus_musculus 9e-36 156
ENSMUST00000177592 Ddi2-201 protein_coding Mus_musculus 9e-36 156
ENSMUST00000102484 Ddi2-001 protein_coding Mus_musculus 9e-36 156

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