C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: tumor protein D52-like 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000346249 TPD52L2-002 ENSG00000101150 9606 + 20:63865290-63891545 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000346249
Transcript ID Adipose Adrenal Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000346249 24.695±0.00 20.163±0.00 20.244±13.29 14.786±9.99 6.282±4.58 18.242±14.82 7.537±2.57 12.764±8.26 15.794±8.80 25.047±11.31 35.460±7.77 18.264±7.28

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004F0 CIL_0004F0_0001 CGP 20:63861213-63891545
CIL_0004EZ CIL_0004EZ_0001 CGP 20:63865228-63936031

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0005737 IDA cytoplasm
GO:0042127 TAS regulation of cell proliferation
GO:0042803 IDA protein homodimerization activity
GO:0044822 IDA poly(A) RNA binding
GO:0046982 IDA protein heterodimerization activity
GO:0048471 IDA perinuclear region of cytoplasm

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000000844 Tpd52l2-002 protein_coding Mus_musculus 0 872
ENSMUST00000184849 Tpd52l2-007 protein_coding Mus_musculus 0 713
ENSMUST00000108799 Tpd52l2-009 protein_coding Mus_musculus 0 625
ENSMUST00000149163 Tpd52l2-001 protein_coding Mus_musculus 0 623
ENSMUST00000183956 Tpd52l2-006 processed_transcript Mus_musculus 0 579
ENSMUST00000184588 Tpd52l2-005 nonsense_mediated_decay Mus_musculus 0 573
ENSMUST00000108800 Tpd52l2-003 protein_coding Mus_musculus 0 405
ENSMUST00000155589 Tpd52l2-011 retained_intron Mus_musculus 0 396
ENSMUST00000069712 Tpd52l2-004 protein_coding Mus_musculus 0 379
ENSMUST00000129390 Tpd52l2-008 retained_intron Mus_musculus 0 377
ENSMUST00000141825 Tpd52l2-010 protein_coding Mus_musculus 0 346
ENSMUST00000130261 Tpd52l2-012 retained_intron Mus_musculus 2.00386e-43 182

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