C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: oxysterol binding protein-like 5
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000348039 OSBPL5-015 ENSG00000021762 9606 - 11:3088001-3165352 protein_coding

Homo sapiens EnsemblGRCh38

Genome
Exciting message
Genes
Structures from Ensembl
Connecting
Transcripts
Structures from Ensembl
Connecting
Powered by Dalliance 0.11.11

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBrainBreastColonHeartLungMuscleOvaryPlacentaENST00000348039
Transcript ID Adipose Brain Breast Colon Heart Lung Muscle Ovary Placenta
ENST00000348039 3.549±0.00 2.009±0.00 1.204±0.00 1.808±0.00 0.636±0.00 0.804±0.00 1.038±0.00 3.808±1.75 2.131±0.23

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002ZO CIL_0002ZO_0001 CGP 11:3087116-3218813

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005783 IEA endoplasmic reticulum
GO:0005829 NAS cytosol
GO:0006869 IEA lipid transport
GO:0006893 NAS Golgi to plasma membrane transport
GO:0008142 NAS oxysterol binding
GO:0008203 NAS cholesterol metabolic process
GO:0015485 IDA cholesterol binding
GO:0016020 IDA membrane
GO:0016021 IEA integral component of membrane
GO:0030301 NAS cholesterol transport

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000020411 Osbpl5-201 protein_coding Mus_musculus 0 1701
ENSMUST00000121409 Osbpl5-002 protein_coding Mus_musculus 0 1701
ENSMUST00000119499 Osbpl5-001 protein_coding Mus_musculus 0 1701
ENSMUST00000149736 Osbpl5-004 retained_intron Mus_musculus 0 460

Loading