C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: BTG3 associated nuclear protein
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000355022 BANP-003 ENSG00000172530 9606 + 16:87951487-88077318 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalColonLungOvaryPlacentaENST00000355022
Transcript ID Adrenal Colon Lung Ovary Placenta
ENST00000355022 0.941±0.00 1.462±0.00 2.138±0.00 1.474±0.19 1.715±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002SY CIL_0002SY_0001 CGP 16:87881546-88118422

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003677 IEA DNA binding
GO:0005515 IPI protein binding
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0007049 IEA cell cycle
GO:0007275 IEA multicellular organismal development
GO:0016568 IEA chromatin modification

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000026354 Banp-003 protein_coding Mus_musculus 0 1432
ENSMUST00000093078 Banp-002 protein_coding Mus_musculus 0 1375
ENSMUST00000173254 Banp-016 protein_coding Mus_musculus 0 1166
ENSMUST00000167711 Banp-004 protein_coding Mus_musculus 0 1083
ENSMUST00000170857 Banp-001 protein_coding Mus_musculus 0 955
ENSMUST00000172628 Banp-005 protein_coding Mus_musculus 0 835
ENSMUST00000173396 Banp-009 protein_coding Mus_musculus 0 828
ENSMUST00000172511 Banp-013 protein_coding Mus_musculus 0 448
ENSMUST00000173925 Banp-006 processed_transcript Mus_musculus 0 425
ENSMUST00000174753 Banp-015 protein_coding Mus_musculus 0 422
ENSMUST00000121807 Gm13608-001 processed_pseudogene Mus_musculus 0 392
ENSMUST00000173201 Banp-007 retained_intron Mus_musculus 0 298
ENSMUST00000174445 Banp-014 nonsense_mediated_decay Mus_musculus 0 283
ENSMUST00000172681 Banp-010 nonsense_mediated_decay Mus_musculus 0 283
ENSMUST00000173753 Banp-012 retained_intron Mus_musculus 0 246
ENSDART00000016310 banp-001 protein_coding Danio_rerio 8.00001e-42 176

Loading