C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: solute carrier family 17 (acidic sugar transporter), member 5
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000355773 SLC17A5-001 ENSG00000119899 9606 - 6:73593379-73654155 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000355773
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000355773 8.226±0.00 2.555±0.00 1.733±0.00 3.178±0.92 2.986±0.89 3.286±1.06 1.379±0.52 9.217±5.86 4.006±1.85 3.493±3.04 1.010±0.63 10.120±5.39 12.415±1.46 3.721±0.83

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006PR CIL_0006PR_0001 CGP 6:73515750-73654155
CIL_0006PQ CIL_0006PQ_0001 CGP 6:73593379-73828316

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005351 TAS sugar:proton symporter activity
GO:0005737 IDA cytoplasm
GO:0005764 IEA lysosome
GO:0005765 IDA lysosomal membrane
GO:0005886 IDA plasma membrane
GO:0005887 TAS integral component of plasma membrane
GO:0006811 TAS ion transport
GO:0006820 TAS anion transport
GO:0006865 IEA amino acid transport
GO:0015136 IDA sialic acid transmembrane transporter activity
GO:0015739 IDA sialic acid transport
GO:0015992 TAS proton transport
GO:0016020 TAS membrane
GO:0016021 IEA integral component of membrane
GO:0016023 IEA cytoplasmic membrane-bounded vesicle
GO:0030054 IEA cell junction
GO:0045202 IEA synapse
GO:0055085 TAS:IEA transmembrane transport

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000052441 Slc17a5-001 protein_coding Mus_musculus 0 1463
ENSMUST00000117645 Slc17a5-002 protein_coding Mus_musculus 0 1120

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