C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: microtubule-associated protein 4
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000360240 MAP4-001 ENSG00000047849 9606 - 3:47851868-48089272 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBrainBreastColonHeartKidneyLiverLungOvaryPlacentaENST00000360240
Transcript ID Bladder Brain Breast Colon Heart Kidney Liver Lung Ovary Placenta
ENST00000360240 7.050±0.00 4.575±0.00 14.433±7.98 8.668±0.00 7.597±0.00 3.127±0.00 11.947±0.00 7.049±0.00 4.298±0.00 10.824±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007U6 CIL_0007U6_0001 VISTA 3:47843366-48458182

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005198 TAS structural molecule activity
GO:0005515 IPI protein binding
GO:0005737 IDA cytoplasm
GO:0005874 IEA microtubule
GO:0005875 TAS microtubule associated complex
GO:0005886 IDA plasma membrane
GO:0007052 IMP mitotic spindle organization
GO:0008017 IEA microtubule binding
GO:0015630 IDA microtubule cytoskeleton
GO:0015631 IEA tubulin binding
GO:0044822 IDA poly(A) RNA binding
GO:0051012 IMP microtubule sliding
GO:0051294 IGI establishment of spindle orientation
GO:0051301 IMP cell division
GO:0070062 IDA extracellular vesicular exosome
GO:0072686 IDA mitotic spindle

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000035055 Map4-001 protein_coding Mus_musculus 0 1840
ENSMUST00000163979 Map4-007 protein_coding Mus_musculus 0 1509
ENSMUST00000165876 Map4-002 protein_coding Mus_musculus 0 1057
ENSMUST00000164930 Map4-006 protein_coding Mus_musculus 0 902
ENSMUST00000169851 Map4-201 protein_coding Mus_musculus 0 424

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