C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: troponin I type 1 (skeletal, slow)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000361379 TNNI1-001 ENSG00000159173 9606 - 1:201404497-201421746 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartLiverLungMuscleOvaryPlacentaTestisENST00000361379
Transcript ID Adipose Adrenal Brain Breast Colon Heart Liver Lung Muscle Ovary Placenta Testis
ENST00000361379 0.040±0.00 0.072±0.00 0.036±0.03 4.380±0.00 0.042±0.00 0.061±0.00 0.470±0.00 0.058±0.00 51.995±23.43 0.027±0.00 0.052±0.00 1.362±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003779 IEA actin binding
GO:0005829 TAS cytosol
GO:0005861 IEA troponin complex
GO:0006942 NAS regulation of striated muscle contraction
GO:0030049 TAS muscle filament sliding
GO:0046872 IEA metal ion binding
GO:0055010 IEA ventricular cardiac muscle tissue morphogenesis

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000152075 Tnni1-003 protein_coding Mus_musculus 0 824
ENSMUST00000148201 Tnni1-002 protein_coding Mus_musculus 0 752
ENSMUST00000152208 Tnni1-001 protein_coding Mus_musculus 0 752
ENSMUST00000154463 Tnni1-004 protein_coding Mus_musculus 0 750
ENSMUST00000139986 Tnni1-007 protein_coding Mus_musculus 0 726
ENSMUST00000129217 Tnni1-008 protein_coding Mus_musculus 0 702
ENSMUST00000137331 Tnni1-006 processed_transcript Mus_musculus 0 592
ENSDART00000062423 tnni1c-001 protein_coding Danio_rerio 8.99999e-40 171

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