C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ubiquitin associated protein 2-like
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000361546 UBAP2L-001 ENSG00000143569 9606 + 1:154225082-154270853 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000361546
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000361546 11.260±0.00 4.435±0.00 0.981±0.00 5.851±2.19 5.455±0.00 7.915±0.00 4.555±3.52 5.596±4.12 2.627±1.01 14.401±0.00 11.386±0.00 14.851±4.59 12.190±2.88 12.920±0.39

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000LS CIL_0000LS_0002 CGP 1:154220179-154275875

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IPI:IEA protein binding
GO:0005671 IDA Ada2/Gcn5/Ada3 transcription activator complex
GO:0007339 IMP binding of sperm to zona pellucida
GO:0044822 IDA poly(A) RNA binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000064639 Ubap2l-202 protein_coding Mus_musculus 0 4355
ENSMUST00000029553 Ubap2l-201 protein_coding Mus_musculus 0 3711
ENSMUST00000090908 Ubap2l-203 protein_coding Mus_musculus 0 3288
ENSDART00000092112 ubap2l-002 protein_coding Danio_rerio 0 326
ENSDART00000092138 ubap2l-001 protein_coding Danio_rerio 0 326

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