C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: aspartyl-tRNA synthetase 2, mitochondrial
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000361951 DARS2-001 ENSG00000117593 9606 + 1:173824503-173858546 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000361951
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000361951 2.658±0.00 2.056±0.00 1.838±0.00 1.446±0.00 3.839±0.00 3.762±1.96 1.715±1.08 5.290±1.65 1.796±0.92 0.722±0.21 1.550±0.00 3.544±1.83 4.239±0.81 2.963±1.42

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001WG CIL_0001WG_0002 CGP 1:173714941-173824720
CIL_0001WF CIL_0001WF_0002 CGP 1:173799550-173858546

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000049 TAS tRNA binding
GO:0000166 IEA nucleotide binding
GO:0003676 IEA nucleic acid binding
GO:0004812 IEA aminoacyl-tRNA ligase activity
GO:0004815 TAS aspartate-tRNA ligase activity
GO:0005515 IPI protein binding
GO:0005524 TAS:IEA ATP binding
GO:0005634 IDA nucleus
GO:0005737 IEA cytoplasm
GO:0005739 IDA mitochondrion
GO:0005759 TAS mitochondrial matrix
GO:0006418 TAS:IEA tRNA aminoacylation for protein translation
GO:0010467 TAS gene expression
GO:0016874 IEA ligase activity
GO:0042803 IPI protein homodimerization activity
GO:0043039 IDA tRNA aminoacylation
GO:0050560 IDA aspartate-tRNA(Asn) ligase activity
GO:0070145 IC mitochondrial asparaginyl-tRNA aminoacylation

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000035430 Dars2-001 protein_coding Mus_musculus 0 1964
ENSMUST00000160591 Dars2-004 retained_intron Mus_musculus 0 1628
ENSMUST00000162654 Dars2-003 retained_intron Mus_musculus 0 1522
ENSMUST00000160759 Dars2-002 retained_intron Mus_musculus 0 1303
ENSMUST00000161748 Dars2-005 processed_transcript Mus_musculus 0 610
ENSMUST00000159922 Dars2-007 processed_transcript Mus_musculus 0 453
ENSMUST00000162398 Dars2-006 retained_intron Mus_musculus 0 243

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