C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: transmembrane protein 183A
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000367242 TMEM183A-001 ENSG00000163444 9606 + 1:203007386-203024848 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000367242
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000367242 7.794±0.00 6.137±0.00 2.478±0.00 13.855±0.61 6.797±0.92 10.602±2.73 3.033±1.18 7.382±3.94 5.088±1.05 6.990±2.77 2.018±0.54 8.948±2.76 9.745±1.99 18.939±0.97

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000TW CIL_0000TW_0002 CGP 1:203007386-203078740

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding
GO:0016021 IEA integral component of membrane

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000049470 Tmem183a-001 protein_coding Mus_musculus 0 2008
ENSMUST00000191237 Tmem183a-003 nonsense_mediated_decay Mus_musculus 0 1016
ENSMUST00000188205 Tmem183a-002 retained_intron Mus_musculus 0 758
ENSMUST00000189572 Tmem183a-005 retained_intron Mus_musculus 0 494
ENSMUST00000121073 Gm15782-001 processed_pseudogene Mus_musculus 0 488
ENSMUST00000185903 Tmem183a-004 protein_coding Mus_musculus 0 350

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