C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: SCY1-like 3 (S. cerevisiae)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000367771 SCYL3-001 ENSG00000000457 9606 - 1:169849631-169893952 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBrainBreastHeartKidneyLungOvaryPlacentaTestisENST00000367771
Transcript ID Adrenal Brain Breast Heart Kidney Lung Ovary Placenta Testis
ENST00000367771 1.185±0.00 0.557±0.00 1.598±0.00 0.517±0.00 0.463±0.08 0.620±0.00 1.774±0.80 0.884±0.30 3.921±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00093H CIL_00093H_0001 VISTA 1:169641255-170243938

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004672 IEA protein kinase activity
GO:0005488 IEA binding
GO:0005515 IPI protein binding
GO:0005524 IEA ATP binding
GO:0005737 IDA cytoplasm
GO:0005794 IDA Golgi apparatus
GO:0006468 IEA protein phosphorylation
GO:0016477 NAS cell migration
GO:0016772 IEA transferase activity, transferring phosphorus-containing groups
GO:0030027 IDA lamellipodium

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000027876 Scyl3-001 protein_coding Mus_musculus 0 1493
ENSMUST00000170359 Scyl3-201 protein_coding Mus_musculus 0 1114
ENSMUST00000161908 Scyl3-003 protein_coding Mus_musculus 0 1109
ENSMUST00000162234 Scyl3-002 nonsense_mediated_decay Mus_musculus 0 752
ENSMUST00000097493 BC055324-002 protein_coding Mus_musculus 0 215
ENSMUST00000190286 RP24-220M12.1-001 processed_pseudogene Mus_musculus 2e-26 126

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