C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000367998 B4GALT3-002 ENSG00000158850 9606 - 1:161171312-161177497 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBrainColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000367998
Transcript ID Adrenal Brain Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000367998 7.807±0.00 2.268±0.03 4.283±0.00 5.431±0.00 9.528±0.00 3.164±0.00 13.039±0.00 4.578±0.00 11.561±6.13 7.289±0.96 9.062±1.38

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000139 TAS Golgi membrane
GO:0003831 IEA beta-N-acetylglucosaminylglycopeptide beta-1,4-galactosyltransferase activity
GO:0003945 IEA N-acetyllactosamine synthase activity
GO:0005737 IDA cytoplasm
GO:0005794 IDA Golgi apparatus
GO:0005975 TAS carbohydrate metabolic process
GO:0008378 TAS galactosyltransferase activity
GO:0016021 IEA integral component of membrane
GO:0018146 TAS keratan sulfate biosynthetic process
GO:0018279 TAS protein N-linked glycosylation via asparagine
GO:0030203 TAS glycosaminoglycan metabolic process
GO:0042339 TAS keratan sulfate metabolic process
GO:0043687 TAS post-translational protein modification
GO:0044267 TAS cellular protein metabolic process
GO:0044281 TAS small molecule metabolic process
GO:0046872 IEA metal ion binding
GO:0070062 IDA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000111313 B4galt3-001 protein_coding Mus_musculus 0 1906
ENSMUST00000064272 B4galt3-002 protein_coding Mus_musculus 0 1906
ENSMUST00000126699 B4galt3-003 processed_transcript Mus_musculus 0 1657
ENSMUST00000129985 B4galt3-004 retained_intron Mus_musculus 0 1616
ENSMUST00000132890 B4galt3-005 retained_intron Mus_musculus 0 885
ENSMUST00000155083 Ppox-002 retained_intron Mus_musculus 0 749
ENSMUST00000151863 B4galt3-008 processed_transcript Mus_musculus 0 725

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