C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: Rho GTPase activating protein 18
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000368149 ARHGAP18-001 ENSG00000146376 9606 - 6:129576132-129710225 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000368149
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000368149 4.778±0.00 2.821±0.00 0.749±0.00 1.049±0.00 4.077±0.44 2.023±0.00 1.740±0.75 5.525±4.74 1.586±0.91 6.675±3.03 0.811±0.33 9.485±4.50 5.445±1.75 4.415±0.26

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001EO CIL_0001EO_0002 CGP 6:129576132-129861547

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005096 IEA GTPase activator activity
GO:0005622 IEA intracellular
GO:0005829 TAS cytosol
GO:0007165 IEA signal transduction
GO:0007264 TAS small GTPase mediated signal transduction
GO:0043547 IEA positive regulation of GTPase activity
GO:0051056 TAS regulation of small GTPase mediated signal transduction

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000039557 Arhgap18-001 protein_coding Mus_musculus 0 2080
ENSMUST00000142284 Arhgap18-002 processed_transcript Mus_musculus 0 1378
ENSMUST00000176060 Arhgap18-003 protein_coding Mus_musculus 0 531

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