C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: RNA guanylyltransferase and 5'-phosphatase
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000369485 RNGTT-001 ENSG00000111880 9606 - 6:88610266-88963596 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000369485
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000369485 1.930±0.00 1.657±0.00 2.728±0.16 1.595±1.03 2.361±0.00 0.955±0.36 2.865±0.00 1.998±0.00 2.072±0.00 1.173±0.00 2.141±0.60 1.593±0.37 4.472±1.08

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006BR CIL_0006BR_0002 CGP 6:88139864-88963596
CIL_0006BS CIL_0006BS_0002 CGP 6:88610266-89085160

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004484 IEA:IDA mRNA guanylyltransferase activity
GO:0004651 IEA polynucleotide 5'-phosphatase activity
GO:0004725 IEA protein tyrosine phosphatase activity
GO:0005525 IEA GTP binding
GO:0005634 IEA:TAS nucleus
GO:0005654 TAS nucleoplasm
GO:0006366 TAS transcription from RNA polymerase II promoter
GO:0006370 IEA:IDA 7-methylguanosine mRNA capping
GO:0006396 IDA RNA processing
GO:0006397 IEA mRNA processing
GO:0006470 IEA protein dephosphorylation
GO:0008138 IEA protein tyrosine/serine/threonine phosphatase activity
GO:0008192 IDA RNA guanylyltransferase activity
GO:0010467 TAS gene expression
GO:0016032 TAS viral process
GO:0016311 IEA dephosphorylation
GO:0016791 IEA phosphatase activity
GO:0035335 IEA peptidyl-tyrosine dephosphorylation
GO:0050355 IDA triphosphatase activity
GO:0098507 IEA polynucleotide 5' dephosphorylation

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000108153 Rngtt-002 protein_coding Mus_musculus 0 2459
ENSMUST00000029942 Rngtt-001 protein_coding Mus_musculus 0 2296
ENSMUST00000155397 Rngtt-004 processed_transcript Mus_musculus 0 974
ENSMUST00000146870 Rngtt-005 processed_transcript Mus_musculus 0 586
ENSMUST00000130138 Rngtt-003 processed_transcript Mus_musculus 3e-39 169

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