C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: wingless-type MMTV integration site family, member 2B
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000369686 WNT2B-001 ENSG00000134245 9606 + 1:112467434-112530165 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; ColonOvaryTestisENST00000369686
Transcript ID Colon Ovary Testis
ENST00000369686 1.225±0.00 3.176±0.00 4.888±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006U0 CIL_0006U0_0002 CGP 1:112396181-112530165
CIL_0006U7 CIL_0006U7_0002 CGP 1:112466541-112620825

Gene Ontology

GO IDEvidence TypeGO Description
GO:0002062 IEP chondrocyte differentiation
GO:0002088 ISS lens development in camera-type eye
GO:0005102 IEA receptor binding
GO:0005109 IBA frizzled binding
GO:0005576 TAS:IEA extracellular region
GO:0005578 IEA proteinaceous extracellular matrix
GO:0005615 NAS extracellular space
GO:0007275 IEA multicellular organismal development
GO:0008584 IEP male gonad development
GO:0016055 IMP:IEA Wnt signaling pathway
GO:0021871 IEP forebrain regionalization
GO:0030182 ISS neuron differentiation
GO:0045165 IBA cell fate commitment
GO:0061072 ISS iris morphogenesis
GO:0061303 ISS cornea development in camera-type eye
GO:0071425 IDA hematopoietic stem cell proliferation
GO:0090263 IDA positive regulation of canonical Wnt signaling pathway

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000029429 Wnt2b-201 protein_coding Mus_musculus 0 1424
ENSMUST00000152666 Pnisr-003 processed_transcript Mus_musculus 0.0002 55
ENSMUST00000146544 Golga2-011 processed_transcript Mus_musculus 0.0007 53
ENSMUST00000114891 Igsf1-003 protein_coding Mus_musculus 0.0007 53

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