C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: Lipid phosphate phosphatase-related protein type 4
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000370185 LPPR4-001 ENSG00000117600 9606 + 1:99263953-99309590 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBrainBreastColonHeartLiverLungOvaryPlacentaTestisENST00000370185
Transcript ID Adipose Brain Breast Colon Heart Liver Lung Ovary Placenta Testis
ENST00000370185 0.306±0.00 4.533±2.33 0.171±0.00 0.273±0.06 0.032±0.00 1.929±0.00 0.117±0.08 0.206±0.00 0.060±0.00 0.620±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007C8 CIL_0007C8_0002 CGP 1:98890245-99309590
CIL_0007C7 CIL_0007C7_0002 CGP 1:99263953-99694541

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003824 IEA catalytic activity
GO:0005515 IEA protein binding
GO:0005887 IEA integral component of plasma membrane
GO:0007409 IEA axonogenesis
GO:0008195 IEA phosphatidate phosphatase activity
GO:0016020 IEA membrane
GO:0042577 IEA lipid phosphatase activity
GO:0046839 IEA phospholipid dephosphorylation
GO:0048839 IEA inner ear development

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000061071 D3Bwg0562e-001 protein_coding Mus_musculus 0 2868
ENSMUST00000125664 D3Bwg0562e-002 retained_intron Mus_musculus 0 1770

Loading