C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: MRG/MORF4L binding protein
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000370487 MRGBP-001 ENSG00000101189 9606 + 20:62796453-62801738 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000370487
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000370487 4.027±0.00 1.790±0.00 0.365±0.00 1.330±0.95 2.212±0.31 1.759±1.30 1.707±1.38 2.530±2.17 1.429±1.13 2.638±2.24 2.611±2.05 7.481±6.99 5.741±0.46 30.527±22.10

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001O4 CIL_0001O4_0001 CGP 20:62708837-62801738
CIL_0001O7 CIL_0001O7_0001 CGP 20:62796453-62814000

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005634 IDA:IEA nucleus
GO:0005654 TAS nucleoplasm
GO:0006325 TAS chromatin organization
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0016568 IEA chromatin modification
GO:0040008 IEA regulation of growth
GO:0043189 IEA H4/H2A histone acetyltransferase complex

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000169630 Mrgbp-201 protein_coding Mus_musculus 0 865
ENSMUST00000029085 Mrgbp-001 protein_coding Mus_musculus 0 865
ENSMUST00000150757 Mrgbp-002 retained_intron Mus_musculus 0 486
ENSMUST00000149969 Mrgbp-005 retained_intron Mus_musculus 0 385
ENSMUST00000123609 Mrgbp-004 retained_intron Mus_musculus 0 385
ENSMUST00000130277 Mrgbp-003 retained_intron Mus_musculus 0 385

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