C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: F-box protein 9
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000370939 FBXO9-003 ENSG00000112146 9606 + 6:53064998-53097888 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000370939
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000370939 6.120±0.00 6.221±0.00 2.640±0.00 10.369±2.58 8.709±4.50 4.452±0.57 5.218±4.35 10.587±7.92 8.932±4.16 5.782±0.00 2.162±0.01 11.266±0.91 10.446±1.20 15.981±4.52

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000151 NAS ubiquitin ligase complex
GO:0004842 NAS ubiquitin-protein transferase activity
GO:0005515 IPI:IEA protein binding
GO:0005737 IDA cytoplasm
GO:0016567 IEA protein ubiquitination
GO:0019005 IDA SCF ubiquitin ligase complex
GO:0031146 IDA SCF-dependent proteasomal ubiquitin-dependent protein catabolic process
GO:0032006 IMP regulation of TOR signaling

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000001402 Fbxo9-002 protein_coding Mus_musculus 0 1543
ENSMUST00000085311 Fbxo9-001 protein_coding Mus_musculus 0 1541
ENSMUST00000159099 Fbxo9-003 protein_coding Mus_musculus 0 538
ENSMUST00000162451 Fbxo9-005 retained_intron Mus_musculus 0 505
ENSMUST00000159453 Fbxo9-007 retained_intron Mus_musculus 0 340
ENSMUST00000162310 Fbxo9-006 retained_intron Mus_musculus 0 217

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