C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: leptin receptor overlapping transcript
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000371065 LEPROT-001 ENSG00000213625 9606 + 1:65420587-65436007 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000371065
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000371065 36.315±0.00 30.186±0.00 3.508±0.00 6.936±4.69 12.647±8.75 13.976±0.00 7.920±4.35 19.006±11.24 7.474±1.57 15.368±3.97 4.375±2.74 11.271±6.03 20.234±1.44 11.127±5.36

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000267 CIL_000267_0001 CGP 1:65248219-65436007
CIL_000264 CIL_000264_0001 CGP 1:65420587-65641559

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005102 IDA receptor binding
GO:0005768 IDA endosome
GO:0005794 IDA Golgi apparatus
GO:0016021 IEA integral component of membrane
GO:0046426 IDA negative regulation of JAK-STAT cascade
GO:0060400 IDA negative regulation of growth hormone receptor signaling pathway
GO:2000009 IDA negative regulation of protein localization to cell surface

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000030254 Leprot-001 protein_coding Mus_musculus 0 536
ENSMUST00000055878 Gm5548-201 processed_pseudogene Mus_musculus 0 422
ENSMUST00000106927 Leprot-002 protein_coding Mus_musculus 6e-31 141

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