C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: phosphoglucomutase 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000371084 PGM1-001 ENSG00000079739 9606 + 1:63593276-63660245 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000371084
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000371084 58.464±0.00 25.204±0.00 5.022±0.00 17.223±9.02 73.900±68.14 25.864±8.61 63.077±42.32 51.492±8.13 52.506±35.59 27.333±19.74 190.317±109.31 28.854±16.63 36.853±8.74 23.862±9.60

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002G7 CIL_0002G7_0001 CGP 1:63367590-63593721
CIL_0002G6 CIL_0002G6_0001 CGP 1:63440770-63593721

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000287 IEA magnesium ion binding
GO:0004614 IDA phosphoglucomutase activity
GO:0005737 NAS cytoplasm
GO:0005829 IBA cytosol
GO:0005975 TAS:IEA carbohydrate metabolic process
GO:0005978 IBA glycogen biosynthetic process
GO:0005980 TAS glycogen catabolic process
GO:0006006 NAS glucose metabolic process
GO:0006094 TAS gluconeogenesis
GO:0006096 TAS glycolytic process
GO:0016868 IEA intramolecular transferase activity, phosphotransferases
GO:0019388 IBA galactose catabolic process
GO:0044281 TAS small molecule metabolic process
GO:0070062 IDA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000058351 Pgm2-001 protein_coding Mus_musculus 0 2272
ENSMUST00000102783 Pgm2-002 protein_coding Mus_musculus 0 1960
ENSMUST00000118202 Gm13914-001 processed_pseudogene Mus_musculus 0 832
ENSDART00000006417 pgm1-001 protein_coding Danio_rerio 0 697

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