C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: carnitine palmitoyltransferase 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000371486 CPT2-001 ENSG00000157184 9606 + 1:53196429-53214197 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000371486
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000371486 4.671±0.00 5.715±0.00 1.590±0.00 2.165±1.06 2.978±1.28 3.722±1.26 4.850±3.72 8.707±1.58 11.783±10.18 1.668±0.23 2.893±1.78 4.471±2.52 14.008±3.20 8.038±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004095 NAS carnitine O-palmitoyltransferase activity
GO:0005634 IDA nucleus
GO:0005730 IDA nucleolus
GO:0005739 IDA mitochondrion
GO:0005743 NAS mitochondrial inner membrane
GO:0006635 IEA fatty acid beta-oxidation
GO:0006853 TAS carnitine shuttle
GO:0016746 IEA transferase activity, transferring acyl groups
GO:0044255 TAS cellular lipid metabolic process
GO:0044281 TAS small molecule metabolic process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000030345 Cpt2-001 protein_coding Mus_musculus 0 2211
ENSMUST00000175651 Cpt2-006 retained_intron Mus_musculus 0 721
ENSMUST00000106719 Cpt2-004 protein_coding Mus_musculus 0 592
ENSMUST00000141738 Cpt2-005 processed_transcript Mus_musculus 0 466
ENSMUST00000106720 Cpt2-003 protein_coding Mus_musculus 0 416
ENSMUST00000131644 Cpt2-002 protein_coding Mus_musculus 3.00018e-42 178

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