C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: forkhead box J3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000372573 FOXJ3-001 ENSG00000198815 9606 - 1:42176539-42335877 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000372573
Transcript ID Bladder Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000372573 1.239±0.00 2.931±0.00 1.068±0.00 0.857±0.00 0.223±0.00 1.356±0.00 0.902±0.00 1.965±0.00 0.862±0.00 1.585±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003700 IEA sequence-specific DNA binding transcription factor activity
GO:0005634 IEA nucleus
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0043565 IEA sequence-specific DNA binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000044564 Foxj3-001 protein_coding Mus_musculus 0 3195
ENSMUST00000106310 Foxj3-002 protein_coding Mus_musculus 0 2176
ENSMUST00000161196 Foxj3-008 retained_intron Mus_musculus 0 833
ENSMUST00000138845 Foxj3-004 protein_coding Mus_musculus 0 717
ENSMUST00000162267 Foxj3-007 protein_coding Mus_musculus 0 717
ENSMUST00000160219 Foxj3-009 protein_coding Mus_musculus 0 536
ENSMUST00000137560 Foxj3-005 protein_coding Mus_musculus 0 394
ENSMUST00000133097 Foxj3-006 processed_transcript Mus_musculus 0 375
ENSMUST00000176012 Foxj3-010 protein_coding Mus_musculus 0 350
ENSMUST00000131413 Foxj3-003 retained_intron Mus_musculus 6e-22 111

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