C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: TAF8 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 43kDa
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000372977 TAF8-004 ENSG00000137413 9606 + 6:42050524-42083274 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000372977
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000372977 3.359±0.00 3.719±0.00 0.545±0.00 0.631±0.03 1.787±0.86 1.439±0.49 2.101±0.99 0.938±0.12 1.790±0.00 0.895±0.00 0.322±0.00 2.128±0.79 2.320±0.83 2.661±0.01

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001833 IEA inner cell mass cell proliferation
GO:0005515 IPI protein binding
GO:0005634 IDA nucleus
GO:0005669 IDA transcription factor TFIID complex
GO:0006351 IEA transcription, DNA-templated
GO:0030154 IEA cell differentiation
GO:0045598 IDA regulation of fat cell differentiation
GO:0045893 IDA positive regulation of transcription, DNA-templated
GO:0046982 IEA protein heterodimerization activity
GO:0048471 IDA perinuclear region of cytoplasm
GO:0051457 IDA maintenance of protein location in nucleus

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000067103 Taf8-201 protein_coding Mus_musculus 0 1210
ENSMUST00000034431 Tmem170-201 protein_coding Mus_musculus 0.00000000009 75
ENSMUST00000038014 Dnajc16-001 protein_coding Mus_musculus 0.00000002 68
ENSMUST00000173269 Neu1-002 retained_intron Mus_musculus 0.000009 58

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