C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: BicC family RNA binding protein 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000373886 BICC1-002 ENSG00000122870 9606 + 10:58513140-58831437 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000373886
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000373886 4.442±0.00 4.315±0.00 5.413±0.00 0.382±0.28 1.942±0.64 2.068±0.71 1.629±0.49 16.556±0.00 0.541±0.00 3.066±0.66 0.469±0.00 4.753±3.68 0.755±0.41 3.464±2.35

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002I9 CIL_0002I9_0002 CGP 10:58513140-59247774

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003676 IEA nucleic acid binding
GO:0003723 IEA RNA binding
GO:0005515 IEA protein binding
GO:0005737 IEA cytoplasm
GO:0007275 IEA multicellular organismal development
GO:0044822 IDA poly(A) RNA binding
GO:0090090 IDA negative regulation of canonical Wnt signaling pathway

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000143791 Bicc1-001 protein_coding Mus_musculus 0 3221
ENSMUST00000014473 Bicc1-003 protein_coding Mus_musculus 0 3024
ENSMUST00000131445 Bicc1-002 protein_coding Mus_musculus 0 2782

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