C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: decapping exoribonuclease
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000375349 DXO-006 ENSG00000204348 9606 - 6:31969813-31972290 protein_coding

Expression Patterns

No expression data.

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000166 IEA nucleotide binding
GO:0000287 ISS magnesium ion binding
GO:0003729 ISS mRNA binding
GO:0005634 IEA nucleus
GO:0006402 ISS mRNA catabolic process
GO:0008152 ISS metabolic process
GO:0008409 ISS 5'-3' exonuclease activity
GO:0034353 ISS RNA pyrophosphohydrolase activity
GO:0050779 ISS RNA destabilization
GO:0071028 ISS nuclear mRNA surveillance
GO:0090305 ISS nucleic acid phosphodiester bond hydrolysis

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000180043 Dxo-201 protein_coding Mus_musculus 0 1343
ENSMUST00000046244 Dxo-001 protein_coding Mus_musculus 0 1343
ENSMUST00000173874 Dxo-002 protein_coding Mus_musculus 0 1026
ENSMUST00000173063 Dxo-009 nonsense_mediated_decay Mus_musculus 0 713
ENSMUST00000173644 Dxo-003 retained_intron Mus_musculus 0 632
ENSMUST00000172612 Dxo-007 protein_coding Mus_musculus 0 444
ENSMUST00000174092 Dxo-010 protein_coding Mus_musculus 0 435
ENSMUST00000173995 Dxo-004 protein_coding Mus_musculus 0 416
ENSMUST00000174569 Dxo-008 nonsense_mediated_decay Mus_musculus 0 335
ENSMUST00000173768 Dxo-006 protein_coding Mus_musculus 0 254

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