C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: BUD13 homolog (S. cerevisiae)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000375445 BUD13-002 ENSG00000137656 9606 - 11:116748170-116772987 protein_coding

Homo sapiens EnsemblGRCh38

Genome
Exciting message
Genes
Structures from Ensembl
Connecting
Transcripts
Structures from Ensembl
Connecting
Powered by Dalliance 0.11.11

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBrainBreastColonHeartKidneyLungMuscleOvaryPlacentaTestisENST00000375445
Transcript ID Adrenal Brain Breast Colon Heart Kidney Lung Muscle Ovary Placenta Testis
ENST00000375445 3.713±0.00 0.550±0.00 1.818±0.00 3.020±0.00 0.831±0.00 1.377±0.00 1.293±0.00 0.278±0.00 6.755±0.00 2.597±0.00 5.703±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008EK CIL_0008EK_0001 VISTA 11:116351165-116951910
CIL_0007RC CIL_0007RC_0001 VISTA 11:116660805-117262910

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000398 ISS mRNA splicing, via spliceosome
GO:0005515 IPI protein binding
GO:0005634 IDA nucleus
GO:0006406 ISS mRNA export from nucleus
GO:0044822 IDA poly(A) RNA binding
GO:0070274 ISS RES complex

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000074957 Bud13-001 protein_coding Mus_musculus 0 863
ENSMUST00000138498 Bud13-002 retained_intron Mus_musculus 0 726
ENSMUST00000154247 Bud13-003 retained_intron Mus_musculus 0 230

Loading