C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: osteomodulin
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000375550 OMD-001 ENSG00000127083 9606 - 9:92414245-92424461 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000375550
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000375550 1.285±0.00 0.467±0.00 0.680±0.10 0.813±0.00 2.316±0.81 1.108±0.12 0.865±0.00 1.094±0.95 1.802±0.04 0.201±0.03 2.072±1.10 1.302±0.78 1.519±0.59

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00019H CIL_00019H_0002 CGP 9:92297358-92620533
CIL_000079 CIL_000079_0002 CGP 9:92325484-92620533
CIL_00007I CIL_00007I_0002 CGP 9:92383967-92424461
CIL_00007H CIL_00007H_0002 CGP 9:92414245-92482506

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding
GO:0005576 TAS extracellular region
GO:0005578 IEA proteinaceous extracellular matrix
GO:0005796 TAS Golgi lumen
GO:0005975 TAS carbohydrate metabolic process
GO:0007155 IEA cell adhesion
GO:0018146 TAS keratan sulfate biosynthetic process
GO:0030203 TAS glycosaminoglycan metabolic process
GO:0042339 TAS keratan sulfate metabolic process
GO:0042340 TAS keratan sulfate catabolic process
GO:0043202 TAS lysosomal lumen
GO:0044281 TAS small molecule metabolic process
GO:0070062 IDA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000065494 Omd-201 protein_coding Mus_musculus 0 1471

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