C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: osteoglycin
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000375561 OGN-001 ENSG00000106809 9606 - 9:92383967-92404613 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000375561
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000375561 1.831±0.00 1.129±0.00 0.217±0.00 1.921±1.02 7.830±0.04 8.837±5.55 4.077±1.04 2.038±0.00 5.652±5.43 10.417±5.87 0.423±0.00 25.218±29.68 4.977±2.26 8.598±7.23

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00019H CIL_00019H_0002 CGP 9:92297358-92620533
CIL_000079 CIL_000079_0002 CGP 9:92325484-92620533
CIL_00007I CIL_00007I_0002 CGP 9:92383967-92424461

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IPI:IEA protein binding
GO:0005576 TAS extracellular region
GO:0005578 IEA proteinaceous extracellular matrix
GO:0005615 IDA extracellular space
GO:0005796 TAS Golgi lumen
GO:0005975 TAS carbohydrate metabolic process
GO:0008083 IEA growth factor activity
GO:0018146 TAS keratan sulfate biosynthetic process
GO:0030203 TAS glycosaminoglycan metabolic process
GO:0031012 IDA extracellular matrix
GO:0031982 IDA vesicle
GO:0042339 TAS keratan sulfate metabolic process
GO:0042340 TAS keratan sulfate catabolic process
GO:0043202 TAS lysosomal lumen
GO:0044281 TAS small molecule metabolic process
GO:0048662 ISS negative regulation of smooth muscle cell proliferation
GO:0070062 IDA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000021822 Ogn-201 protein_coding Mus_musculus 0 1186

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