C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: sialidase 1 (lysosomal sialidase)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000375631 NEU1-001 ENSG00000204386 9606 - 6:31859052-31862906 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000375631
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000375631 9.963±0.00 10.713±0.00 4.990±0.00 7.056±1.91 7.980±5.66 7.694±5.38 4.093±3.90 18.907±18.13 12.709±7.64 14.782±10.31 5.359±4.05 27.426±16.13 50.427±3.23 10.741±0.45

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004308 IDA exo-alpha-sialidase activity
GO:0005515 IEA protein binding
GO:0005764 IDA lysosome
GO:0005886 IEA plasma membrane
GO:0006665 TAS sphingolipid metabolic process
GO:0006687 TAS glycosphingolipid metabolic process
GO:0009313 IMP oligosaccharide catabolic process
GO:0016042 IEA lipid catabolic process
GO:0030054 IDA cell junction
GO:0031410 IEA cytoplasmic vesicle
GO:0043202 TAS lysosomal lumen
GO:0043231 IDA intracellular membrane-bounded organelle
GO:0044281 TAS small molecule metabolic process
GO:0052794 IEA exo-alpha-(2->3)-sialidase activity
GO:0052795 IEA exo-alpha-(2->6)-sialidase activity
GO:0052796 IEA exo-alpha-(2->8)-sialidase activity
GO:0070062 IDA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000007253 Neu1-001 protein_coding Mus_musculus 0 1153
ENSMUST00000173269 Neu1-002 retained_intron Mus_musculus 0 664
ENSMUST00000174715 Neu1-003 retained_intron Mus_musculus 0 407

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