C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: filamin binding LIM protein 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000375766 FBLIM1-002 ENSG00000162458 9606 + 1:15758419-15786594 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000375766
Transcript ID Adrenal Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000375766 8.951±0.00 1.236±0.28 6.497±0.00 12.918±0.00 6.557±0.00 0.297±0.00 5.505±0.00 0.811±0.00 29.012±21.08 8.741±2.27 15.114±14.42

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007QM CIL_0007QM_0001 VISTA 1:15548708-16149793

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001725 IDA stress fiber
GO:0005829 TAS cytosol
GO:0005925 IDA focal adhesion
GO:0008270 IEA zinc ion binding
GO:0008360 IEA regulation of cell shape
GO:0016337 IMP single organismal cell-cell adhesion
GO:0031005 IDA filamin binding
GO:0033623 IMP regulation of integrin activation
GO:0034329 TAS cell junction assembly

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000034431 Tmem170-201 protein_coding Mus_musculus 0.0000001 64
ENSMUST00000173269 Neu1-002 retained_intron Mus_musculus 0.000005 58

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