C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: KDEL (Lys-Asp-Glu-Leu) containing 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000376004 KDELC1-001 ENSG00000134901 9606 - 13:102784281-102799007 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000376004
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000376004 1.699±0.00 1.626±0.00 0.801±0.00 0.532±0.12 1.312±0.10 1.137±0.42 0.485±0.19 2.885±0.00 1.844±0.44 0.711±0.12 0.072±0.00 3.416±2.07 5.922±1.24 1.469±0.69

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00058K CIL_00058K_0002 CGP 13:102765990-102799007
CIL_0000WG CIL_0000WG_0001 CGP 13:102784281-102841535

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding
GO:0005788 ISS endoplasmic reticulum lumen

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000065767 Kdelc1-001 protein_coding Mus_musculus 0 1869
ENSMUST00000027213 Kdelc1-005 protein_coding Mus_musculus 0 1306
ENSMUST00000149665 Kdelc1-003 retained_intron Mus_musculus 0 1013
ENSMUST00000141125 Kdelc1-002 retained_intron Mus_musculus 0 1013
ENSMUST00000152643 Kdelc1-006 nonsense_mediated_decay Mus_musculus 0 424

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