C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: threonine synthase-like 1 (S. cerevisiae)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000376356 THNSL1-001 ENSG00000185875 9606 + 10:25016658-25026664 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000376356
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000376356 0.365±0.00 0.710±0.00 0.701±0.15 1.112±0.13 0.793±0.07 0.393±0.15 2.617±0.13 1.173±0.50 0.547±0.13 0.754±0.00 2.597±0.71 0.850±0.75 3.552±0.04

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00077W CIL_00077W_0002 CGP 10:24848607-25062279
CIL_0002D4 CIL_0002D4_0001 CGP 10:24981979-25062279
CIL_0002D3 CIL_0002D3_0001 CGP 10:25016658-25602226

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component
GO:0005634 IDA nucleus
GO:0005737 IDA cytoplasm
GO:0005739 IDA mitochondrion
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000054591 Thnsl1-001 protein_coding Mus_musculus 0 2305
ENSMUST00000102951 Thnsl1-003 protein_coding Mus_musculus 0 658
ENSMUST00000102952 Thnsl1-002 protein_coding Mus_musculus 0 658
ENSMUST00000138965 Thnsl1-004 protein_coding Mus_musculus 0 357

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